Transcript: lnc-SERP2-17:2

Basic information

LNCipedia transcript ID: lnc-SERP2-17:2 
LNCipedia gene ID: lnc-SERP2-17
Ensembl Gene ID: ENSG00000278156
Ensembl Transcript ID: ENST00000617014
Location (hg38): chr13:44577490-44579147
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1658 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000617014.1
Alternative gene names: ENSG00000278156.1; TSC22D1-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -59.1533 non-coding 
CPAT coding probability 22.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SERP2-17:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 TSC22D1-AS1:4
4.1 TSC22D1-AS1:4
5.0 TSC22D1-AS1:4
5.1 lnc-KL-301:2
5.2 lnc-SERP2-17:2