Transcript: lnc-SLC15A4-14:2

Basic information

LNCipedia transcript ID: lnc-SLC15A4-14:2 
LNCipedia gene ID: lnc-SLC15A4-14
Location (hg38): chr12:127144875-127146032
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 596 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00020983; NONHSAT031848
Alternative gene names: XLOC_010248; linc-DHX37-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -91.3411 non-coding 
CPAT coding probability 1.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SLC15A4-14:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SLC15A4-14:2
3.1 lnc-SLC15A4-14:2
4.0 lnc-SLC15A4-14:2
4.1 lnc-SLC15A4-14:2
5.0 lnc-SLC15A4-14:2
5.1 lnc-DHX37-34:2
5.2 lnc-SLC15A4-14:2