Transcript: lnc-SPATA31D1-4:11

Basic information

LNCipedia transcript ID: lnc-SPATA31D1-4:11 
LNCipedia gene ID: lnc-SPATA31D1-4
Location (hg38): chr9:82273403-82453803
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 613 bp
Exons: 7
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000228430.4|ENST00000585454.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -106.6558 non-coding 
CPAT coding probability 1.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SPATA31D1-4:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FAM75D1-4:32
5.0 lnc-FAM75D1-4:32
5.1 lnc-SECISBP2-89:11
5.2 lnc-SPATA31D1-4:11