Transcript: lnc-SPATA31D1-4:15

Basic information

LNCipedia transcript ID: lnc-SPATA31D1-4:15 
LNCipedia gene ID: lnc-SPATA31D1-4
Location (hg38): chr9:82273403-82536232
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 718 bp
Exons: 7
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000228430.4|ENST00000591257.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -92.3881 non-coding 
CPAT coding probability 2.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SPATA31D1-4:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-FAM75D1-4:34
5.0 lnc-FAM75D1-4:34
5.1 lnc-SECISBP2-89:15
5.2 lnc-SPATA31D1-4:15