Transcript: lnc-SPATA31D1-4:2

Basic information

LNCipedia transcript ID: lnc-SPATA31D1-4:2 
LNCipedia gene ID: lnc-SPATA31D1-4
Location (hg38): chr9:82243284-82428287
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 636 bp
Exons: 7
Sources: NONCODE v4
Alternative transcript names: NONHSAT132704
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -92.3881 non-coding 
CPAT coding probability 1.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-SPATA31D1-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM75D1-4:3
4.0 lnc-FAM75D1-4:3
4.1 lnc-FAM75D1-4:3
5.0 lnc-FAM75D1-4:3
5.1 lnc-SECISBP2-89:2
5.2 lnc-SPATA31D1-4:2