Transcript: lnc-STAP1-13:2

Basic information

LNCipedia transcript ID: lnc-STAP1-13:2 
LNCipedia gene ID: lnc-STAP1-13
Location (hg38): chr4:66003263-66034129
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 204 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00008096; NONHSAT096674
Alternative gene names: XLOC_003562; linc-STAP1-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -360.2578 non-coding 
CPAT coding probability 1.75% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-STAP1-13:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-STAP1-2:1
3.1 lnc-STAP1-1:1
4.0 lnc-STAP1-13:2
4.1 lnc-STAP1-13:2
5.0 lnc-STAP1-13:2
5.1 lnc-CEP135-85:2
5.2 lnc-STAP1-13:2