Transcript: lnc-STMP1-8:1

Basic information

LNCipedia transcript ID: lnc-STMP1-8:1 
LNCipedia gene ID: lnc-STMP1-8
Location (hg38): chr7:136092925-136437208
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 874 bp
Exons: 6
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000445293; ENST00000445293.1; AC009784.3-001; OTTHUMT00000340909.1; NONHSAT123541
Alternative gene names: ENSG00000232053; AC009784.3; ENSG00000232053.1; OTTHUMG00000155618.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -314.2563 non-coding 
CPAT coding probability 3.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-STMP1-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CHRM2-2:1
3.1 lnc-CHRM2-2:1
4.0 lnc-AC015987.1-8:2
4.1 lnc-AC015987.1-8:2
5.0 lnc-AC015987.1-8:2
5.1 lnc-TMEM140-18:1
5.2 lnc-STMP1-8:1