Transcript: lnc-STMP1-8:2

Basic information

LNCipedia transcript ID: lnc-STMP1-8:2 
LNCipedia gene ID: lnc-STMP1-8
Ensembl Gene ID: ENSG00000232053
Ensembl Transcript ID: ENST00000445293
Location (hg38): chr7:136092925-136437163
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 889 bp
Exons: 7
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT123540; ENST00000445293.2; ENST00000445293.6
Alternative gene names: ENSG00000232053.2; AC009784.3; ENSG00000232053.6; AC078845.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -18.8832 non-coding 
CPAT coding probability 12.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-STMP1-8:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CHRM2-2:6
4.0 lnc-AC015987.1-8:1
4.1 lnc-AC015987.1-8:1
5.0 lnc-AC015987.1-8:1
5.1 lnc-TMEM140-18:2
5.2 lnc-STMP1-8:2