Transcript: lnc-STMP1-8:5

Basic information

LNCipedia transcript ID: lnc-STMP1-8:5 
LNCipedia gene ID: lnc-STMP1-8
Location (hg38): chr7:136177261-136177731
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 381 bp
Exons: 2
Sources: Hangauer et al., 2013
Alternative transcript names: FPKM1_group_30468_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -137.7567 non-coding 
CPAT coding probability 0.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-STMP1-8:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CHRM2-2:8
4.0 lnc-AC015987.1-8:4
4.1 lnc-AC015987.1-8:4
5.0 lnc-AC015987.1-8:4
5.1 lnc-TMEM140-18:5
5.2 lnc-STMP1-8:5