Transcript: lnc-TAF15-1:4

Basic information

LNCipedia transcript ID: lnc-TAF15-1:4 
LNCipedia gene ID: lnc-TAF15-1
Ensembl Gene ID: ENSG00000270240
Ensembl Transcript ID: ENST00000615709
Location (hg38): chr17:35885562-35885858
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 297 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000615709.1
Alternative gene names: ENSG00000270240.2; AC015849.2; AC015849.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -153.814 non-coding 
CPAT coding probability 13.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TAF15-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-TAF15-1:4
4.1 lnc-TAF15-1:4
5.0 lnc-TAF15-1:4
5.1 lnc-RPL19-71:4
5.2 lnc-TAF15-1:4