Transcript: lnc-TMEM17-2:2

Basic information

LNCipedia transcript ID: lnc-TMEM17-2:2 
LNCipedia gene ID: lnc-TMEM17-2
Location (hg38): chr2:62611389-62662794
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1262 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00004277; NONHSAT071026
Alternative gene names: XLOC_002117; linc-TMEM17


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 12.1303 non-coding 
CPAT coding probability 1.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM17-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TMEM17-2:2
3.1 lnc-TMEM17-2:2
4.0 lnc-TMEM17-2:2
4.1 lnc-TMEM17-2:2
5.0 lnc-TMEM17-2:2
5.1 lnc-GKN2-180:2
5.2 lnc-TMEM17-2:2