Transcript: lnc-TMEM18-3:7

Basic information

LNCipedia transcript ID: lnc-TMEM18-3:7 
LNCipedia gene ID: lnc-TMEM18-3
Location (hg38): chr2:697153-714338
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 706 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00004095; NONHSAT068584
Alternative gene names: XLOC_001931; linc-TMEM18-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 4.1023 non-coding 
CPAT coding probability 14.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TMEM18-3:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TMEM18-2:1
3.1 lnc-TMEM18-2:1
4.0 lnc-TMEM18-3:7
4.1 lnc-TMEM18-3:7
5.0 lnc-TMEM18-3:7
5.1 lnc-RAD51AP2-222:7
5.2 lnc-TMEM18-3:7