Transcript: lnc-TP53TG3-4:2

Basic information

LNCipedia transcript ID: lnc-TP53TG3-4:2 
LNCipedia gene ID: lnc-TP53TG3-4
Location (hg38): chr16:32262910-32265348
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2235 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00024267
Alternative gene names: XLOC_011919; linc-C16orf58-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 43.0551 non-coding 
CPAT coding probability 10.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-TP53TG3-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TP53TG3-2:1
3.1 lnc-TP53TG3-4:2
4.0 lnc-TP53TG3-4:2
4.1 lnc-TP53TG3-4:2
5.0 lnc-TP53TG3-4:2
5.1 lnc-SULT1A2-137:2
5.2 lnc-TP53TG3-4:2