Transcript: lnc-TP53TG3F-8:2

Basic information

LNCipedia transcript ID: lnc-TP53TG3F-8:2 
LNCipedia gene ID: lnc-TP53TG3F-8
Location (hg38): chr16:35243390-35244667
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 486 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024376; NONHSAT142172
Alternative gene names: XLOC_011699; linc-ORC6-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -42.9062 non-coding 
CPAT coding probability 0.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TP53TG3F-8:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CTD-2144E22.5.1-2:1
3.1 lnc-CTD-2144E22.5.1-4:1
4.0 lnc-CTD-2144E22.5.1-4:1
4.1 lnc-CTD-2144E22.5.1-4:1
5.0 lnc-CTD-2144E22.5.1-4:1
5.1 lnc-ZNF646-123:2
5.2 lnc-TP53TG3F-8:2