Transcript: lnc-TTC3-5:1

Basic information

LNCipedia transcript ID: lnc-TTC3-5:1 
LNCipedia gene ID: lnc-TTC3-5
Location (hg38): chr21:37267784-37268484
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 701 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000608405.1
Alternative gene names: ENSG00000272948.1; AP001412.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -256.0033 non-coding 
CPAT coding probability 3.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TTC3-5:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TTC3-5:1
4.0 lnc-TTC3-5:1
4.1 lnc-TTC3-5:1
5.0 lnc-TTC3-5:1
5.1 lnc-SIM2-22:3
5.2 lnc-TTC3-5:1