Transcript: lnc-TTC3-5:4

Basic information

LNCipedia transcript ID: lnc-TTC3-5:4 
LNCipedia gene ID: lnc-TTC3-5
Location (hg38): chr21:37267736-37272798
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 5063 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000272948.1|ENCT00000271330.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 3.1199 non-coding 
CPAT coding probability 1.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TTC3-5:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TTC3-5:4
5.0 lnc-TTC3-5:4
5.1 lnc-SIM2-22:2
5.2 lnc-TTC3-5:4