Transcript: lnc-ZBED5-1:7

Basic information

LNCipedia transcript ID: lnc-ZBED5-1:7 
LNCipedia gene ID: lnc-ZBED5-1
Location (hg38): chr11:10884885-10899322
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 431 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000250041.2|ENST00000503469.2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 1.6282 non-coding 
CPAT coding probability 4.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZBED5-1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ZBED5-1:7
5.0 lnc-ZBED5-1:7
5.1 lnc-C11orf16-44:5
5.2 lnc-ZBED5-1:7