Transcript: lnc-ZBTB18-2:2

Basic information

LNCipedia transcript ID: lnc-ZBTB18-2:2 
LNCipedia gene ID: lnc-ZBTB18-2
Location (hg38): chr1:243917392-243954589
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2427 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000226828.1|MICT00000034197.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -47.4995 non-coding 
CPAT coding probability 23.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZBTB18-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ZNF238-2:4
5.0 lnc-ZNF238-2:4
5.1 lnc-KMO-34:2
5.2 lnc-ZBTB18-2:2