Transcript: lnc-ZIC1-5:10

Basic information

LNCipedia transcript ID: lnc-ZIC1-5:10 
LNCipedia gene ID: lnc-ZIC1-5
Location (hg38): chr3:147940005-148007127
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 865 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000239922.1|ENCT00000295280.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -242.7655 non-coding 
CPAT coding probability 0.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZIC1-5:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ZIC1-5:10
5.0 lnc-ZIC1-5:10
5.1 lnc-ZIC1-5:10
5.2 lnc-ZIC1-5:10