Transcript: lnc-ZMYM3-1:2

Basic information

LNCipedia transcript ID: lnc-ZMYM3-1:2 
LNCipedia gene ID: lnc-ZMYM3-1
Location (hg38): chrX:71183300-71198193
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 999 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000228427.1|FTMT28900002137.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -40.2471 non-coding 
CPAT coding probability 3.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZMYM3-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ZMYM3-1:2
5.0 lnc-ZMYM3-1:2
5.1 lnc-ZMYM3-1:2
5.2 lnc-ZMYM3-1:2