Transcript: lnc-ZNF22-2:3

Basic information

LNCipedia transcript ID: lnc-ZNF22-2:3 
LNCipedia gene ID: lnc-ZNF22-2
Ensembl Gene ID: ENSG00000243349
Ensembl Transcript ID: ENST00000427229
Location (hg38): chr10:45147394-45171389
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3637 bp
Exons: 11
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT013081; ENST00000427229.2
Alternative gene names: ENSG00000243349.2; RP11-445N18.7; AL358394.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 3.5855 non-coding 
CPAT coding probability 16.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF22-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF22-2:3
4.0 lnc-ZNF22-2:3
4.1 lnc-ZNF22-2:3
5.0 lnc-ZNF22-2:3
5.1 lnc-NPY4R2-54:3
5.2 lnc-ZNF22-2:3