Transcript: lnc-ZNF599-3:3

Basic information

LNCipedia transcript ID: lnc-ZNF599-3:3 
LNCipedia gene ID: lnc-ZNF599-3
Location (hg38): chr19:34848989-34850940
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 718 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00027734; NONHSAT065174
Alternative gene names: XLOC_013308; linc-ZNF599-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 15.9636 non-coding 
CPAT coding probability 0.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF599-3:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZNF599-2:3
3.1 lnc-ZNF599-3:3
4.0 lnc-ZNF599-3:3
4.1 lnc-ZNF599-3:3
5.0 lnc-ZNF599-3:3
5.1 lnc-SCGB2B2-3:6
5.2 lnc-ZNF599-3:3