Transcript: lnc-ZNF599-3:5

Basic information

LNCipedia transcript ID: lnc-ZNF599-3:5 
LNCipedia gene ID: lnc-ZNF599-3
Ensembl Gene ID: ENSG00000271109
Ensembl Transcript ID: ENST00000604749
Location (hg38): chr19:34850628-34860576
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 570 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT065178; ENST00000604749.1
Alternative gene names: ENSG00000271109.1; CTC-523E23.11; AC008555.5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 36.024 non-coding 
CPAT coding probability 1.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZNF599-3:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF599-3:5
4.0 lnc-ZNF599-3:5
4.1 lnc-ZNF599-3:5
5.0 lnc-ZNF599-3:5
5.1 lnc-SCGB2B2-3:2
5.2 lnc-ZNF599-3:5