Transcript: BTBD9-AS1:1

Basic information

LNCipedia transcript ID: BTBD9-AS1:1 
HGNC Gene Symbol: BTBD9-AS1    
HGNC Full Gene Name: BTBD9 antisense RNA 1
Ensembl Gene ID: ENSG00000226533
Ensembl Transcript ID: ENST00000412822
Location (hg38): chr6:38481692-38482531
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 560 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000412822.1; BTBD9-AS1-001; OTTHUMT00000040430.1; NONHSAT112314
Alternative gene names: ENSG00000226533.1; BTBD9-AS1; OTTHUMG00000014632.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -117.2828 non-coding 
CPAT coding probability 0.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
BTBD9-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DNAH8-3:1
4.0 BTBD9-AS1:1
4.1 BTBD9-AS1:1
5.0 BTBD9-AS1:1
5.1 BTBD9-AS1:1
5.2 BTBD9-AS1:1