Transcript: CRTC3-AS1:1

Basic information

LNCipedia transcript ID: CRTC3-AS1:1 
HGNC Gene Symbol: CRTC3-AS1    
HGNC Full Gene Name: CRTC3 antisense RNA 1
Ensembl Gene ID: ENSG00000259736
Ensembl Transcript ID: ENST00000559531
Location (hg38): chr15:90620007-90717141
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 657 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000559531.1; RP11-387D10.2-001; OTTHUMT00000417937.1; NONHSAT048407
Alternative gene names: ENSG00000259736.1; RP11-387D10.2; OTTHUMG00000172335.1; CRTC3-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -39.5151 non-coding 
CPAT coding probability 1.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CRTC3-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HDDC3-4:1
4.0 CRTC3-AS1:1
4.1 CRTC3-AS1:1
5.0 CRTC3-AS1:1
5.1 CRTC3-AS1:1
5.2 CRTC3-AS1:1