Transcript: DLG1-AS1:2

Basic information

LNCipedia transcript ID: DLG1-AS1:2 
HGNC Gene Symbol: DLG1-AS1    
HGNC Full Gene Name: DLG1 antisense RNA 1
Ensembl Gene ID: ENSG00000227375
Ensembl Transcript ID: ENST00000430666
Location (hg38): chr3:197298252-197303747
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1694 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000430666; ENST00000430666.1; AC092937.2-001; OTTHUMT00000340294.1
Alternative gene names: ENSG00000227375; AC092937.2; ENSG00000227375.1; OTTHUMG00000155484.1; DLG1-AS1; ENSG00000227375.5;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -172.5175 non-coding 
CPAT coding probability 1.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DLG1-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SENP5-1:1
3.1 lnc-SENP5-3:2
4.0 DLG1-AS1:2
4.1 DLG1-AS1:2
5.0 DLG1-AS1:2
5.1 DLG1-AS1:2
5.2 DLG1-AS1:2