Transcript: DNM3OS:5

Basic information

LNCipedia transcript ID: DNM3OS:5 
HGNC Gene Symbol: DNM3OS    
HGNC Full Gene Name: DNM3 opposite strand/antisense RNA
Ensembl Gene ID: ENSG00000230630
Ensembl Transcript ID: ENST00000417354
Location (hg38): chr1:172136531-172144794
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4358 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000417354.2
Alternative gene names: ENSG00000230630.2; DNM3OS; MIR199A2HG; DNM3-AS1; ENSG00000230630.3; ENSG00000230630.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 29.3875 non-coding 
CPAT coding probability 1.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DNM3OS:5 no no no no

Available literature

  1. Yin (2010), TWISTing stemness, inflammation and proliferation of epithelial ovarian cancer cells through MIR199A2/214., Oncogene
  2. Lee (2009), Twist-1 regulates the miR-199a/214 cluster during development., Nucleic Acids Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 DNM3OS:5
4.1 DNM3OS:5
5.0 DNM3OS:5
5.1 DNM3OS:5
5.2 DNM3OS:5