Transcript: EDNRB-AS1:3

Basic information

LNCipedia transcript ID: EDNRB-AS1:3 
HGNC Gene Symbol: EDNRB-AS1    
HGNC Full Gene Name: EDNRB antisense RNA 1
Ensembl Gene ID: ENSG00000225579
Ensembl Transcript ID: ENST00000422405
Location (hg38): chr13:77828222-77833950
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 601 bp
Exons: 5
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000422405; ENST00000422405.1; RP11-318G21.3-001; OTTHUMT00000045353.1; NONHSAT034427
Alternative gene names: ENSG00000225579; RP11-318G21.3; ENSG00000225579.1; OTTHUMG00000017113.1; EDNRB-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -133.3593 non-coding 
CPAT coding probability 1.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
EDNRB-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SLAIN1-1:1
3.1 lnc-SLAIN1-1:1
4.0 EDNRB-AS1:3
4.1 EDNRB-AS1:3
5.0 EDNRB-AS1:3
5.1 EDNRB-AS1:3
5.2 EDNRB-AS1:3