Transcript: EIF1B-AS1:6

Basic information

LNCipedia transcript ID: EIF1B-AS1:6 
LNCipedia gene ID: EIF1B-AS1
Location (hg38): chr3:40242195-40309512
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1117 bp
Exons: 5
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000502134
Alternative gene names: ENSG00000246446; FLJ33065


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -12.0266 non-coding 
CPAT coding probability 24.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
EIF1B-AS1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CX3CR1-2:2
3.1 lnc-CX3CR1-2:2
4.0 EIF1B-AS1:6
4.1 EIF1B-AS1:6
5.0 EIF1B-AS1:6
5.1 EIF1B-AS1:6
5.2 EIF1B-AS1:6