Transcript: FAM66E:2

Basic information

LNCipedia transcript ID: FAM66E:2 
LNCipedia gene ID: FAM66E
Location (hg38): chr8:7955014-7986601
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 872 bp
Exons: 6
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000529252; ENST00000529252.1; FAM66E-001; OTTHUMT00000383806.1; NONHSAT124841
Alternative gene names: ENSG00000225725; FAM66E; ENSG00000225725.3; OTTHUMG00000165403.2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 140.9979 coding 
CPAT coding probability 71.30% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
FAM66E:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZNF705B-1:1
3.1 lnc-ZNF705B-1:1
4.0 FAM66E:2
4.1 FAM66E:2
5.0 FAM66E:2
5.1 FAM66E:2
5.2 FAM66E:2