Transcript: FAM66E:3

Basic information

LNCipedia transcript ID: FAM66E:3 
HGNC Gene Symbol: FAM66E    
HGNC Full Gene Name: family with sequence similarity 66 member E
Ensembl Gene ID: ENSG00000225725
Ensembl Transcript ID: ENST00000529252
Location (hg38): chr8:7955014-8008755
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1433 bp
Exons: 7
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000529252.2
Alternative gene names: ENSG00000225725.4; FAM66E;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 140.9979 coding 
CPAT coding probability 70.67% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
FAM66E:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF705B-1:4
4.0 FAM66E:3
4.1 FAM66E:3
5.0 FAM66E:3
5.1 FAM66E:3
5.2 FAM66E:3