Transcript: FAM95B1:6

Basic information

LNCipedia transcript ID: FAM95B1:6 
HGNC Gene Symbol: FAM95B1    
HGNC Full Gene Name: family with sequence similarity 95 member B1
Ensembl Gene ID: ENSG00000223839
Ensembl Transcript ID: ENST00000455995
Location (hg38): chr9:40321299-40329218
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4236 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000455995.1; FAM95B1-001; OTTHUMT00000129776.1; ENST00000455995.5
Alternative gene names: ENSG00000223839.2; FAM95B1; OTTHUMG00000058623.1; ENSG00000223839.3; ENSG00000223839.7; DKFZp686P0734


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 41.3219 non-coding 
CPAT coding probability 10.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
FAM95B1:6 no no no no

Available literature

  1. Mirza (2015), Transcriptomic landscape of lncRNAs in inflammatory bowel disease., Genome Med
  2. Wang (2015), The long noncoding RNA LINC01207 promotes proliferation of lung adenocarcinoma., Am J Cancer Res


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANKRD20A2-1:2
4.0 FAM95B1:6
4.1 FAM95B1:6
5.0 FAM95B1:6
5.1 FAM95B1:6
5.2 FAM95B1:6