Transcript: FAM95B1:9

Basic information

LNCipedia transcript ID: FAM95B1:9 
LNCipedia gene ID: FAM95B1
RefSeq ID: NR_026759
Location (hg38): chr9:40323571-40329220
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1543 bp
Exons: 5
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT131301; NR_026759; NR_026759.1
Alternative gene names: DKFZp686P0734; FAM95B1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -7.5772 non-coding 
CPAT coding probability 23.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
FAM95B1:9 no no no no

Available literature

  1. Mirza (2015), Transcriptomic landscape of lncRNAs in inflammatory bowel disease., Genome Med
  2. Wang (2015), The long noncoding RNA LINC01207 promotes proliferation of lung adenocarcinoma., Am J Cancer Res


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANKRD20A2-1:4
4.0 FAM95B1:9
4.1 FAM95B1:9
5.0 FAM95B1:9
5.1 FAM95B1:9
5.2 FAM95B1:9