Transcript: GPC5-AS2:1

Basic information

LNCipedia transcript ID: GPC5-AS2:1 
LNCipedia gene ID: GPC5-AS2
RefSeq ID: NR_120382
Location (hg38): chr13:92339794-92352207
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 415 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_120382; NR_120382.1
Alternative gene names: ; GPC5-AS2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -78.0674 non-coding 
CPAT coding probability 1.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
GPC5-AS2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DCT-5:2
4.0 GPC5-AS2:1
4.1 GPC5-AS2:1
5.0 GPC5-AS2:1
5.1 GPC5-AS2:1
5.2 GPC5-AS2:1