Transcript: HCG20:4

Basic information

LNCipedia transcript ID: HCG20:4 
LNCipedia gene ID: HCG20
Location (hg38): chr6:30781912-30794324
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3296 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000228022.1|MICT00000300610.1
Alternative gene names: AB023051.1; NCRNA00149


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 7.9623 non-coding 
CPAT coding probability 1.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
HCG20:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 HCG20:4
5.0 HCG20:4
5.1 HCG20:4
5.2 HCG20:4