Transcript: HCP5:1
Basic information
LNCipedia transcript ID: HCP5:1
HGNC Gene Symbol: HCP5
HGNC Full Gene Name:
HLA complex P5
Ensembl Gene ID:
ENSG00000206337
Ensembl Transcript ID:
ENST00000414046
Location (hg38): chr6:31400702-31465809
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 2658 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000414046.2; HCP5-001; OTTHUMT00000076614.4; NONHSAT108768
Alternative gene names: ENSG00000206337.6; HCP5; OTTHUMG00000031282.4; ENSG00000206337.10; D6S2650E; P5-1
RNA sequence:
Structure:
Protein coding potential
In stringent set: yes
Locus conservation
| Locus conservation? |  |
 |
 |
 |
|---|---|---|---|---|
| HCP5:1 | no | no | no | no |
Available literature
- Jiang (2015), LncRNA2Function: a comprehensive resource for functional investigation of human lncRNAs based on RNA-seq data., BMC Genomics
- Kulski (1999), The P5 multicopy gene family in the MHC is related in sequence to human endogenous retroviruses HERV-L and HERV-16., Immunogenetics
- Vernet (1993), A novel coding sequence belonging to a new multicopy gene family mapping within the human MHC class I region., Immunogenetics
LNCipedia transcript ID history
| LNCipedia version | LNCipedia transcript ID |
|---|---|
| 3.1 | lnc-MICB-3:1 |
| 4.0 | HCP5:1 |
| 4.1 | HCP5:1 |
| 5.0 | HCP5:1 |
| 5.1 | HCP5:1 |
| 5.2 | HCP5:1 |