Transcript: HDAC11-AS1:2

Basic information

LNCipedia transcript ID: HDAC11-AS1:2 
LNCipedia gene ID: HDAC11-AS1
Location (hg38): chr3:13476988-13480053
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 509 bp
Exons: 2
Sources: Refseq - Dec 2014
Alternative transcript names: NR_046690
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -118.0035 non-coding 
CPAT coding probability 0.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
HDAC11-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NUP210-1:2
4.0 HDAC11-AS1:2
4.1 HDAC11-AS1:2
5.0 HDAC11-AS1:2
5.1 HDAC11-AS1:2
5.2 HDAC11-AS1:2