Transcript: IGSF11-AS1:2

Basic information

LNCipedia transcript ID: IGSF11-AS1:2 
HGNC Gene Symbol: IGSF11-AS1    
HGNC Full Gene Name: IGSF11 antisense RNA 1
Ensembl Gene ID: ENSG00000239877
Ensembl Transcript ID: ENST00000477009
Location (hg38): chr3:118943073-118948241
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1604 bp
Exons: 4
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT091371; ENST00000477009.2
Alternative gene names: ENSG00000239877.2; IGSF11-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -69.7451 non-coding 
CPAT coding probability 6.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
IGSF11-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C3orf30-1:2
4.0 IGSF11-AS1:2
4.1 IGSF11-AS1:2
5.0 IGSF11-AS1:2
5.1 IGSF11-AS1:2
5.2 IGSF11-AS1:2