Transcript: INE1:2

Basic information

LNCipedia transcript ID: INE1:2 
HGNC Gene Symbol: INE1    
HGNC Full Gene Name: inactivation escape 1
Ensembl Gene ID: ENSG00000224975
Ensembl Transcript ID: ENST00000456273
Location (hg38): chrX:47204921-47205865
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 945 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000456273.1
Alternative gene names: ENSG00000224975.1; INE1; NCRNA00010


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -0.8869 non-coding 
CPAT coding probability 1.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
INE1:2 yes no no no

Available literature

  1. Esposito (1997), Escape from X inactivation of two new genes associated with DXS6974E and DXS7020E., Genomics


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CDK16-3:2
4.0 INE1:2
4.1 INE1:2
5.0 INE1:2
5.1 INE1:2
5.2 INE1:2