Transcript: INE1:3

Basic information

LNCipedia transcript ID: INE1:3 
LNCipedia gene ID: INE1
Location (hg38): chrX:47205037-47205452
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 416 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT136862
Alternative gene names: NCRNA00010


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -133.875 non-coding 
CPAT coding probability 0.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
INE1:3 yes no no no

Available literature

  1. Esposito (1997), Escape from X inactivation of two new genes associated with DXS6974E and DXS7020E., Genomics


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CDK16-3:3
4.0 INE1:3
4.1 INE1:3
5.0 INE1:3
5.1 INE1:3
5.2 INE1:3