Transcript: JAZF1-AS1:4

Basic information

LNCipedia transcript ID: JAZF1-AS1:4 
LNCipedia gene ID: JAZF1-AS1
Location (hg38): chr7:28239884-28241896
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1663 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000444500.1; JAZF1-AS1-003; OTTHUMT00000327760.1
Alternative gene names: ENSG00000234336.1; JAZF1-AS1; OTTHUMG00000152771.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -94.7847 non-coding 
CPAT coding probability 0.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
JAZF1-AS1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CREB5-1:3
4.0 JAZF1-AS1:4
4.1 JAZF1-AS1:4
5.0 JAZF1-AS1:4
5.1 JAZF1-AS1:4
5.2 JAZF1-AS1:4