Transcript: JAZF1-AS1:5

Basic information

LNCipedia transcript ID: JAZF1-AS1:5 
HGNC Gene Symbol: JAZF1-AS1    
HGNC Full Gene Name: JAZF1 antisense RNA 1
Ensembl Gene ID: ENSG00000234336
Ensembl Transcript ID: ENST00000444500
Location (hg38): chr7:28239884-28243917
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3684 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT119755; ENST00000444500.2
Alternative gene names: ENSG00000234336.2; JAZF1-AS1; ENSG00000234336.6;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -31.333 non-coding 
CPAT coding probability 0.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
JAZF1-AS1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CREB5-1:5
4.0 JAZF1-AS1:5
4.1 JAZF1-AS1:5
5.0 JAZF1-AS1:5
5.1 JAZF1-AS1:5
5.2 JAZF1-AS1:5