Transcript: LINC00463:1

Basic information

LNCipedia transcript ID: LINC00463:1 
HGNC Gene Symbol: LINC00463    
HGNC Full Gene Name: long intergenic non-protein coding RNA 463
Ensembl Gene ID: ENSG00000234056
Ensembl Transcript ID: ENST00000413501
Location (hg38): chr13:25172828-25180079
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1147 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000413501; ENST00000413501.1; RP11-165I9.4-001; OTTHUMT00000044223.1; NONHSAT032582
Alternative gene names: ENSG00000234056; RP11-165I9.4; ENSG00000234056.1; OTTHUMG00000016604.1; AMER2-AS1; LINC00463; TCONS_l2_00007499


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -52.4433 non-coding 
CPAT coding probability 2.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00463:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FAM123A-1:1
3.1 lnc-FAM123A-1:1
4.0 LINC00463:1
4.1 LINC00463:1
5.0 LINC00463:1
5.1 LINC00463:1
5.2 LINC00463:1