Transcript: LINC00474:3

Basic information

LNCipedia transcript ID: LINC00474:3 
LNCipedia gene ID: LINC00474
RefSeq ID: NR_024032
Location (hg38): chr9:115888265-115925098
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 564 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_024032; NR_024032.1
Alternative gene names: EST-YD1; LINC00474


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -112.7858 non-coding 
CPAT coding probability 5.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00474:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PAPPA-AS1-3:4
4.0 LINC00474:3
4.1 LINC00474:3
5.0 LINC00474:3
5.1 LINC00474:3
5.2 LINC00474:3