Transcript: LINC00476:4

Basic information

LNCipedia transcript ID: LINC00476:4 
LNCipedia gene ID: LINC00476
RefSeq ID: NR_023390
Location (hg38): chr9:95806088-95875977
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 8014 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT133392; NR_023390; NR_023390.1
Alternative gene names: ; LINC00476


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.6257 non-coding 
CPAT coding probability 4.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00476:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PTCH1-3:10
4.0 LINC00476:4
4.1 LINC00476:4
5.0 LINC00476:4
5.1 LINC00476:4
5.2 LINC00476:4