Transcript: LINC00612:5

Basic information

LNCipedia transcript ID: LINC00612:5 
LNCipedia gene ID: LINC00612
Location (hg38): chr12:9057769-9058865
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 221 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00020709; NONHSAT026382
Alternative gene names: XLOC_010007; linc-M6PR; MGC40170; FLJ41814


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 47.16% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00612:5 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-A2M-1:4
3.1 lnc-A2M-1:4
4.0 LINC00612:5
4.1 LINC00612:5
5.0 LINC00612:5
5.1 LINC00612:5
5.2 LINC00612:5