Transcript: LINC00621:2

Basic information

LNCipedia transcript ID: LINC00621:2 
HGNC Gene Symbol: LINC00621    
HGNC Full Gene Name: long intergenic non-protein coding RNA 621
Ensembl Gene ID: ENSG00000262619
Ensembl Transcript ID: ENST00000577004
Location (hg38): chr13:22894656-22916369
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1177 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000577004.1; RP11-363G2.5-001; OTTHUMT00000439167.1; NONHSAT140109
Alternative gene names: ENSG00000262619.1; RP11-363G2.5; OTTHUMG00000177835.1; LINC00621;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 89.0416 coding 
CPAT coding probability 19.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00621:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SACS-2:1
4.0 LINC00621:2
4.1 LINC00621:2
5.0 LINC00621:2
5.1 LINC00621:2
5.2 LINC00621:2

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