Transcript: LINC00671:2

Basic information

LNCipedia transcript ID: LINC00671:2 
LNCipedia gene ID: LINC00671
RefSeq ID: NR_027254
Location (hg38): chr17:42874674-42898734
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1844 bp
Exons: 6
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT053780; NR_027254; NR_027254.1
Alternative gene names: ; LINC00671


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -0.9256 non-coding 
CPAT coding probability 76.04% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00671:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AARSD1-1:5
4.0 LINC00671:2
4.1 LINC00671:2
5.0 LINC00671:2
5.1 LINC00671:2
5.2 LINC00671:2