Transcript: LINC00923:7

Basic information

LNCipedia transcript ID: LINC00923:7 ?
HGNC Gene Symbol: LINC00923    ?
HGNC Full Gene Name: long intergenic non-protein coding RNA 923
Location (hg19): chr15:98382044-98417235
Strand: -
Class: intergenic
Transcript size: 359 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 83 - Dec 2015
Alternative transcript names: NONHSAT050745; ENST00000558179.1
Alternative gene names: ENSG00000251209.7; LINC00923;


RNA sequence:

Structure:

Protein coding potential


Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding ?
Lee translation initiation sites 0 non-coding ?
Highest peak:0
PhyloCSF score -105.3921 non-coding ?
CPAT coding probability 3.81% non-coding ?
Bazzini small ORFs 0 non-coding ?
In stringent set: yes

Locus conservation

Locus conservation?
LINC00923:7 no no

Secondary structure information

RNAfold image: download
Randfold minimum free energy:
Randfold P-value:

Targetting miRNAs

No microRNA targets found with MirTarget2

Available literature

  1. Parsa (2016), Genome-Wide Association of CKD Progression: The Chronic Renal Insufficiency Cohort Study., Journal of the American Society of Nephrology : JASN


LNCipedia transcript ID history

LNCipedia version Deprecated transcript ID
3.1 lnc-RP11-82I10.1.1-1:4