Transcript: LINC00930:3

Basic information

LNCipedia transcript ID: LINC00930:3 
LNCipedia gene ID: LINC00930
RefSeq ID: NR_021493
Location (hg38): chr15:92567818-92572263
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1762 bp
Exons: 4
Sources: Broad Institute; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: TCONS_00023207; NR_021493; NR_021493.1
Alternative gene names: XLOC_011584; linc-VPS33B-3; ; LINC00930


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.1496 non-coding 
CPAT coding probability 18.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00930:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FAM174B-2:2
3.1 lnc-FAM174B-2:2
4.0 LINC00930:3
4.1 LINC00930:3
5.0 LINC00930:3
5.1 LINC00930:3
5.2 LINC00930:3